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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6961: 15329 - Hypothetical Protein, at 543904 to 547836
15329
mRNA_6962: 15330 - K03132 TAF7 transcription initiation factor TFIID subunit 7, at 547886 to 549459
15330
mRNA_6963: 15331 - Hypothetical Protein, at 549842 to 550144
15331
mRNA_6964: 15332 - K18754 LIN28 protein lin-28, at 551090 to 553316
15332
mRNA_6965: 15333 - Hypothetical Protein, at 553877 to 555010
15333
Group
Condition
mRNA_6961
mRNA_6962
mRNA_6963
mRNA_6964
mRNA_6965
15329
15330
15331
15332
15333
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-1.4
-0.4
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.8
0.0
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
-0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.0
-0.2
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.3
-0.3
0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
-0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.3
-0.1
-0.3
growth on oleic acid
YNB Glucose
-0.1
-0.0
0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.7
0.1
0.4
growth on oleic acid
YNB Oleic Acid
-0.1
0.1
0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.3
-0.0
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.1
0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.3
0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.3
0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.3
0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.4
-0.0
0.3
ypd buoyancy
40 hrs High Buoyancy
0.0
0.5
-0.0
0.2
auxotrophy
YNB Glucose
0.1
0.1
0.1
0.5
auxotrophy
Dropout Complete
0.0
0.2
0.1
0.6
growth on ypd
YPD
0.2
0.8
0.1
0.6
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