Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6957: 15325 - K13100 CWC22 pre-mRNA-splicing factor CWC22, at 529794 to 532653 15325 mRNA_6958: 15326 - K09238 ACE2 metallothionein expression activator, at 534004 to 536795 15326 mRNA_6959: 15327 - K14805 DDX24, MAK5 ATP-dependent RNA helicase DDX24/MAK5, at 537105 to 540222 15327 mRNA_6960: 15328 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 540769 to 543741 15328 mRNA_6961: 15329 - Hypothetical Protein, at 543904 to 547836 15329
Group Condition mRNA_6957 mRNA_6958 mRNA_6959 mRNA_6960 mRNA_6961
15325
15326
15327
15328
15329
facs on lipid accumulation Sorted Low BODIPY Gate   -2.4   -0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy   -1.7   -0.2 0.0
ypd buoyancy 40 hrs No Buoyancy Separation   -1.3   -0.4 0.2
facs on lipid accumulation Sorted No BODIPY Gate   -1.4   -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy   -0.5   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.3   -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.0   -0.4 -0.2
growth on oleic acid YNB Oleic Acid   -0.3   0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2   -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine   0.2   0.0 -0.0
growth on ypd YPD   0.1   0.0 0.2
auxotrophy Dropout Complete   0.2   0.1 0.0
growth on oleic acid YNB Glucose   0.6   0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine   0.3   0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy   0.6   -0.0 -0.0
auxotrophy YNB Glucose   0.5   0.2 0.1
growth on ricinoleic acid YNB Glucose   1.2   -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   1.0   -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate   0.8   0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid   1.9   0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   1.8   0.3 -0.0
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