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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6957: 15325 - K13100 CWC22 pre-mRNA-splicing factor CWC22, at 529794 to 532653
15325
mRNA_6958: 15326 - K09238 ACE2 metallothionein expression activator, at 534004 to 536795
15326
mRNA_6959: 15327 - K14805 DDX24, MAK5 ATP-dependent RNA helicase DDX24/MAK5, at 537105 to 540222
15327
mRNA_6960: 15328 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 540769 to 543741
15328
mRNA_6961: 15329 - Hypothetical Protein, at 543904 to 547836
15329
Group
Condition
mRNA_6957
mRNA_6958
mRNA_6959
mRNA_6960
mRNA_6961
15325
15326
15327
15328
15329
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.4
-0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
-1.7
-0.2
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.3
-0.4
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.4
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.4
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.0
-0.0
growth on ypd
YPD
0.1
0.0
0.2
auxotrophy
Dropout Complete
0.2
0.1
0.0
growth on oleic acid
YNB Glucose
0.6
0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.6
-0.0
-0.0
auxotrophy
YNB Glucose
0.5
0.2
0.1
growth on ricinoleic acid
YNB Glucose
1.2
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.0
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.8
0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
1.9
0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.8
0.3
-0.0
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