Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6954: 15322 - K10591 NEDD4, RSP5 E3 ubiquitin-protein ligase NEDD4, at 519193 to 522362 15322 mRNA_6955: 15323 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 523015 to 527499 15323 mRNA_6956: 15324 - K00720 UGCG ceramide glucosyltransferase, at 528007 to 529680 15324 mRNA_6957: 15325 - K13100 CWC22 pre-mRNA-splicing factor CWC22, at 529794 to 532653 15325 mRNA_6958: 15326 - K09238 ACE2 metallothionein expression activator, at 534004 to 536795 15326
Group Condition mRNA_6954 mRNA_6955 mRNA_6956 mRNA_6957 mRNA_6958
15322
15323
15324
15325
15326
facs on lipid accumulation Sorted Low BODIPY Gate   -1.0 -1.7   -2.4
facs on lipid accumulation Sorted No BODIPY Gate   -0.6 -1.7   -1.4
ypd buoyancy 40 hrs No Buoyancy Separation   -0.7 -0.9   -1.3
ypd buoyancy 40 hrs High Buoyancy   0.0 -0.7   -1.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.3 -0.3   -0.3
auxotrophy YNB Glucose 75mM Methionine   -0.3 -0.4   0.2
growth on ypd YPD   -0.1 -0.3   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2 -0.2   0.2
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.2   -0.5
facs on lipid accumulation Sorted High BODIPY Gate   -0.1 -0.9   0.8
auxotrophy YNB Glucose 75mM Arginine   -0.2 -0.2   0.3
ypd buoyancy 40 hrs Low Buoyancy   -0.1 -0.4   0.6
growth on oleic acid YNB Glucose   -0.2 -0.1   0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 0.3   -0.0
growth on oleic acid YNB Oleic Acid   0.2 0.6   -0.3
auxotrophy Dropout Complete   -0.1 0.4   0.2
auxotrophy YNB Glucose   -0.1 0.1   0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 -0.5   1.0
growth on ricinoleic acid YNB Ricinoleic Acid   -0.7 -0.4   1.9
growth on ricinoleic acid YNB Glucose   0.0 0.3   1.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.3 1.0   1.8
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