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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6953: 15321 - K13719 OTU1, YOD1 ubiquitin thioesterase OTU1, at 517419 to 518782
15321
mRNA_6954: 15322 - K10591 NEDD4, RSP5 E3 ubiquitin-protein ligase NEDD4, at 519193 to 522362
15322
mRNA_6955: 15323 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 523015 to 527499
15323
mRNA_6956: 15324 - K00720 UGCG ceramide glucosyltransferase, at 528007 to 529680
15324
mRNA_6957: 15325 - K13100 CWC22 pre-mRNA-splicing factor CWC22, at 529794 to 532653
15325
Group
Condition
mRNA_6953
mRNA_6954
mRNA_6955
mRNA_6956
mRNA_6957
15321
15322
15323
15324
15325
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.6
-1.7
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-1.0
-1.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.7
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
-0.7
-0.9
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.1
-0.9
ypd buoyancy
40 hrs High Buoyancy
0.2
0.0
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.2
growth on ypd
YPD
-0.1
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.1
-0.4
growth on oleic acid
YNB Glucose
0.1
-0.2
-0.1
auxotrophy
Dropout Complete
-0.3
-0.1
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.1
0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
0.2
auxotrophy
YNB Glucose
0.3
-0.1
0.1
growth on ricinoleic acid
YNB Glucose
0.1
0.0
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
1.0
growth on oleic acid
YNB Oleic Acid
0.0
0.2
0.6
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