Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6952: 15320 - K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48, at 512124 to 517290 15320 mRNA_6953: 15321 - K13719 OTU1, YOD1 ubiquitin thioesterase OTU1, at 517419 to 518782 15321 mRNA_6954: 15322 - K10591 NEDD4, RSP5 E3 ubiquitin-protein ligase NEDD4, at 519193 to 522362 15322 mRNA_6955: 15323 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 523015 to 527499 15323 mRNA_6956: 15324 - K00720 UGCG ceramide glucosyltransferase, at 528007 to 529680 15324
Group Condition mRNA_6952 mRNA_6953 mRNA_6954 mRNA_6955 mRNA_6956
15320
15321
15322
15323
15324
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.4   -0.6 -1.7
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.2   -1.0 -1.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.2   -0.7 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -1.2 0.4   -0.1 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.6   -0.7 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0   -0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 0.0   -0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1   -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1   0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2   0.0 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.1   -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0   -0.2 -0.2
growth on oleic acid YNB Glucose -0.0 0.1   -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.2   0.1 0.3
growth on ypd YPD 0.3 -0.1   -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1   -0.3 1.0
auxotrophy Dropout Complete 0.1 -0.3   -0.1 0.4
growth on ricinoleic acid YNB Glucose -0.2 0.1   0.0 0.3
auxotrophy YNB Glucose 0.0 0.3   -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0   0.1 0.2
growth on oleic acid YNB Oleic Acid -0.1 0.0   0.2 0.6
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