Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6949: 15317 - HMMPfam-Cenp-O kinetochore centromere component-PF09496, at 506847 to 507636 15317 mRNA_6950: 15318 - KOG4505 Na+/H+ antiporter, at 508659 to 510404 15318 mRNA_6951: 15319 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 510991 to 511843 15319 mRNA_6952: 15320 - K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48, at 512124 to 517290 15320 mRNA_6953: 15321 - K13719 OTU1, YOD1 ubiquitin thioesterase OTU1, at 517419 to 518782 15321
Group Condition mRNA_6949 mRNA_6950 mRNA_6951 mRNA_6952 mRNA_6953
15317
15318
15319
15320
15321
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -3.8 -0.3 -0.6 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -3.5 -0.1 -1.2 0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -2.9 -0.4 0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.0 0.1 -0.0 0.6
ypd buoyancy 40 hrs Low Buoyancy 0.0 -1.0 0.6 -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 0.2 -0.6 -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.7 0.6 -0.5 -0.9 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.7 0.6 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 0.1 -0.0 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.2 0.7 -0.1 -0.1
growth on ricinoleic acid YNB Glucose 0.5 0.4 -0.4 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 0.5 -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 0.0 1.0 -0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 0.3 0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.0 0.1 0.7 -0.1 -0.0
growth on ypd YPD 0.6 0.2 0.0 0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.3 0.8 -0.2 -0.1
growth on oleic acid YNB Glucose 0.1 0.2 0.7 -0.0 0.1
auxotrophy Dropout Complete 0.2 0.3 0.8 0.1 -0.3
auxotrophy YNB Glucose 0.4 0.2 0.4 0.0 0.3
growth on oleic acid YNB Oleic Acid 0.2 0.6 0.7 -0.1 0.0
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