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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6948: 15316 - BLAST putative ephrin type-a receptor 8-like protein [Botry..., at 505314 to 506461
15316
mRNA_6949: 15317 - HMMPfam-Cenp-O kinetochore centromere component-PF09496, at 506847 to 507636
15317
mRNA_6950: 15318 - KOG4505 Na+/H+ antiporter, at 508659 to 510404
15318
mRNA_6951: 15319 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 510991 to 511843
15319
mRNA_6952: 15320 - K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48, at 512124 to 517290
15320
Group
Condition
mRNA_6948
mRNA_6949
mRNA_6950
mRNA_6951
mRNA_6952
15316
15317
15318
15319
15320
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.4
-3.5
-0.1
-1.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.4
-3.8
-0.3
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.3
-2.9
-0.4
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
-0.3
-1.0
0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.0
-1.0
0.6
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.7
0.6
-0.5
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.6
0.2
-0.6
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.0
-0.0
0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.4
0.0
1.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.5
0.2
0.7
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.2
-0.1
0.3
0.1
growth on ricinoleic acid
YNB Glucose
0.3
0.5
0.4
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.7
0.3
-0.7
0.6
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.0
0.1
0.7
-0.1
growth on ypd
YPD
-0.0
0.6
0.2
0.0
0.3
auxotrophy
YNB Glucose
-0.1
0.4
0.2
0.4
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.1
0.3
0.5
-0.4
auxotrophy
Dropout Complete
-0.1
0.2
0.3
0.8
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.3
0.3
0.8
-0.2
growth on oleic acid
YNB Glucose
0.5
0.1
0.2
0.7
-0.0
growth on oleic acid
YNB Oleic Acid
0.3
0.2
0.6
0.7
-0.1
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