Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478965 to 480801 15306 mRNA_6939: 15307 - K17973 NAA25, MDM20 N-terminal acetyltransferase B complex non-catalytic subunit, at 480977 to 484798 15307 mRNA_6940: 15308 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 484867 to 487020 15308 mRNA_6941: 15309 - K02154 ATPeV0A, ATP6N V-type H+-transporting ATPase subunit a, at 487367 to 491016 15309 mRNA_6942: 15310 - K15029 EIF3L translation initiation factor 3 subunit L, at 491144 to 493608 15310
Group Condition mRNA_6938 mRNA_6939 mRNA_6940 mRNA_6941 mRNA_6942
15306
15307
15308
15309
15310
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7   -0.1   -0.6
auxotrophy YNB Glucose 75mM Methionine -0.5   -0.0   -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.5   0.1   -0.7
growth on ricinoleic acid YNB Glucose 0.0   0.2   -1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0   -0.3   0.3
auxotrophy Dropout Complete -0.2   -0.1   -0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.1   0.1   -1.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   -0.4   0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.3   -0.4   -0.7
growth on ypd YPD -1.1   0.4   0.0
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.3   -0.2
growth on oleic acid YNB Glucose 0.1   0.4   -0.9
auxotrophy YNB Glucose 0.3   -0.3   -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3   -0.1   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3   -0.1   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3   -0.2   0.4
ypd buoyancy 40 hrs High Buoyancy -0.3   0.2   0.4
ypd buoyancy 40 hrs Median Buoyancy 0.2   -0.1   0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.4   0.0   0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2   0.1   1.0
growth on oleic acid YNB Oleic Acid 0.3   -0.2   1.3
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