Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6935: 15303 - K12830 SF3B3, SAP130, RSE1 splicing factor 3B subunit 3, at 469424 to 473834 15303 mRNA_6936: 15304 - K09669 FUT10 alpha-1,3-fucosyltransferase 10, at 473933 to 475521 15304 mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476107 to 478851 15305 mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478965 to 480801 15306 mRNA_6939: 15307 - K17973 NAA25, MDM20 N-terminal acetyltransferase B complex non-catalytic subunit, at 480977 to 484798 15307
Group Condition mRNA_6935 mRNA_6936 mRNA_6937 mRNA_6938 mRNA_6939
15303
15304
15305
15306
15307
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.4 0.1 -1.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.5 0.1 -0.7  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.5 -0.2 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.6 0.1 -0.3  
growth on ypd YPD   0.5 -0.1 -1.1  
growth on ricinoleic acid YNB Glucose   -0.5 -0.2 0.0  
auxotrophy YNB Glucose 75mM Methionine   0.3 -0.2 -0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.3 0.3 -0.3  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.5 -0.2 0.4  
growth on oleic acid YNB Glucose   -0.2 -0.0 0.1  
growth on oleic acid YNB Oleic Acid   -0.1 -0.3 0.3  
facs on lipid accumulation Sorted Low BODIPY Gate   0.3 0.2 -0.5  
auxotrophy Dropout Complete   0.2 -0.0 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate   0.3 -0.3 0.1  
ypd buoyancy 40 hrs Low Buoyancy   0.2 0.1 -0.2  
ypd buoyancy 40 hrs No Buoyancy Separation   0.6 0.1 -0.5  
auxotrophy YNB Glucose 75mM Arginine   0.4 -0.0 -0.1  
ypd buoyancy 40 hrs High Buoyancy   0.3 0.3 -0.3  
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.1 0.2  
auxotrophy YNB Glucose   0.3 -0.2 0.3  
facs on lipid accumulation Sorted No BODIPY Gate   0.1 0.2 0.3  
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