Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6934: 15302 - K12871 CCDC12 coiled-coil domain-containing protein 12, at 468467 to 469312 15302 mRNA_6935: 15303 - K12830 SF3B3, SAP130, RSE1 splicing factor 3B subunit 3, at 469424 to 473834 15303 mRNA_6936: 15304 - K09669 FUT10 alpha-1,3-fucosyltransferase 10, at 473933 to 475521 15304 mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476107 to 478851 15305 mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478965 to 480801 15306
Group Condition mRNA_6934 mRNA_6935 mRNA_6936 mRNA_6937 mRNA_6938
15302
15303
15304
15305
15306
facs on lipid accumulation Sorted High BODIPY Gate -1.6   0.3 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.4 0.1 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.8   -0.5 -0.2 0.4
facs on lipid accumulation Sorted Low BODIPY Gate -1.0   0.3 0.2 -0.5
growth on oleic acid YNB Oleic Acid -0.7   -0.1 -0.3 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6   -0.5 0.1 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4   -0.5 -0.2 -0.3
growth on ricinoleic acid YNB Glucose 0.3   -0.5 -0.2 0.0
growth on oleic acid YNB Glucose -0.1   -0.2 -0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.7   0.1 0.2 0.3
auxotrophy Dropout Complete -0.0   0.2 -0.0 -0.2
growth on ypd YPD 0.7   0.5 -0.1 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3   -0.3 0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.9   -0.6 0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2   0.3 0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.5   0.3 -0.2 -0.5
ypd buoyancy 40 hrs Low Buoyancy 0.0   0.2 0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.2   0.4 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3   0.6 0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy 0.2   0.1 0.1 0.2
auxotrophy YNB Glucose 0.2   0.3 -0.2 0.3
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