Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6909: 15277 - K14315 NDC1, TMEM48 nucleoporin NDC1, at 408529 to 411391 15277 mRNA_6910: 15278 - KOG2287 Galactosyltransferases, at 411729 to 414888 15278 mRNA_6911: 15279 - K03660 OGG1 N-glycosylase/DNA lyase, at 415549 to 417203 15279 mRNA_6912: 15280 - K12833 SF3B14 pre-mRNA branch site protein p14, at 417441 to 418066 15280 mRNA_6913: 15281 - Hypothetical Protein, at 419561 to 420635 15281
Group Condition mRNA_6909 mRNA_6910 mRNA_6911 mRNA_6912 mRNA_6913
15277
15278
15279
15280
15281
growth on ricinoleic acid YNB Glucose -0.8   0.0   -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.5   -0.3   0.3
auxotrophy YNB Glucose 75mM Methionine -0.5   0.1   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   -0.1   -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   -0.0   0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4   0.1   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3   0.1   0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3   -0.2   -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3   0.1   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   0.1   0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   -0.2   -0.1
growth on oleic acid YNB Oleic Acid 0.1   -0.2   0.2
ypd buoyancy 40 hrs High Buoyancy -0.1   0.0   0.1
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.0   0.2
auxotrophy Dropout Complete -0.2   0.1   0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0   0.3   -0.1
growth on oleic acid YNB Glucose 0.0   -0.2   0.3
auxotrophy YNB Glucose -0.3   0.2   0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   -0.2   0.4
growth on ypd YPD 0.2   -0.1   0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2   -0.0   0.2
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