Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6873: 15241 - K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase, at 326924 to 328423 15241 mRNA_6874: 15242 - BLAST similar to An13g00570 [Aspergillus niger], at 328504 to 329604 15242 mRNA_6875: 15243 - K10563 mutM, fpg formamidopyrimidine-DNA glycosylase, at 329876 to 331485 15243 mRNA_6876: 15244 - Hypothetical Protein, at 331964 to 333369 15244 mRNA_6877: 15245 - KOG3912 Predicted integral membrane protein, at 333940 to 335664 15245
Group Condition mRNA_6873 mRNA_6874 mRNA_6875 mRNA_6876 mRNA_6877
15241
15242
15243
15244
15245
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.2 -0.1 -1.8 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.4 -0.1 -1.6 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2 0.0 -1.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2 -0.0 -0.6 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.7 0.5 -0.9 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1 0.1 -0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.2 -0.5 0.0 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.1 -0.1 -0.5 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.1 0.3 -0.5 0.1
growth on ypd YPD 1.0 -0.3 -0.6 0.3 -0.1
growth on oleic acid YNB Oleic Acid 0.3 0.2 0.2 -0.0 -0.2
growth on oleic acid YNB Glucose 0.1 0.4 0.1 0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.0 0.3 -0.2 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.1 0.1 0.5 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.2 -0.2 0.4 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.3 -0.4 0.8 0.2
auxotrophy YNB Glucose 75mM Methionine 0.4 0.4 0.0 0.5 -0.1
auxotrophy Dropout Complete 0.4 0.1 -0.1 1.0 0.0
growth on ricinoleic acid YNB Glucose 0.0 0.3 0.4 0.6 0.1
auxotrophy YNB Glucose 75mM Arginine 0.5 0.4 -0.0 1.0 0.1
auxotrophy YNB Glucose 0.4 0.4 0.1 1.1 0.2
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