Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6869: 15237 - K06125 COQ2 4-hydroxybenzoate polyprenyltransferase, at 314323 to 315416 15237 mRNA_6870: 15238 - K08736 MSH3 DNA mismatch repair protein MSH3, at 315464 to 319765 15238 mRNA_6871: 15239 - K17600 VPS54 vacuolar protein sorting-associated protein 54, at 319945 to 325501 15239 mRNA_6872: 15240 - KOG3035 Isoamyl acetate-hydrolyzing esterase, at 325677 to 326693 15240 mRNA_6873: 15241 - K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase, at 326924 to 328423 15241
Group Condition mRNA_6869 mRNA_6870 mRNA_6871 mRNA_6872 mRNA_6873
15237
15238
15239
15240
15241
ypd buoyancy 40 hrs No Buoyancy Separation   -0.1 -0.5 -1.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 -0.1 -0.7 -0.1
ypd buoyancy 40 hrs High Buoyancy   0.0 -0.4 -0.5 0.2
facs on lipid accumulation Sorted Low BODIPY Gate   -0.2 -1.0 0.4 0.0
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 -0.2 0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.0 -0.3 0.0
growth on ricinoleic acid YNB Glucose   0.0 0.2 -0.3 0.0
facs on lipid accumulation Sorted No BODIPY Gate   0.2 -0.2 -0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.3 -0.1 0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine   0.1 0.2 -0.1 0.4
ypd buoyancy 40 hrs Low Buoyancy   0.1 0.1 0.2 0.2
growth on oleic acid YNB Oleic Acid   0.2 0.6 -0.2 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 0.1 0.5 0.1
auxotrophy Dropout Complete   0.2 0.5 -0.2 0.4
auxotrophy YNB Glucose 75mM Arginine   0.2 0.4 -0.2 0.5
growth on oleic acid YNB Glucose   0.0 0.2 0.7 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 0.0 1.0 -0.0
auxotrophy YNB Glucose   0.3 0.3 0.2 0.4
growth on ypd YPD   0.1 0.2 0.1 1.0
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.0 0.5 0.8 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 0.4 1.4 0.4
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