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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6865: 15233 - HMMPfam-Spc24 subunit of Ndc80-PF08286,SUPERFAMILY--SSF143026, at 308236 to 309069
15233
mRNA_6866: 15234 - Hypothetical Protein, at 309366 to 310327
15234
mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310458 to 312954
15235
mRNA_6868: 15236 - Hypothetical Protein, at 312999 to 313640
15236
mRNA_6869: 15237 - K06125 COQ2 4-hydroxybenzoate polyprenyltransferase, at 314323 to 315416
15237
Group
Condition
mRNA_6865
mRNA_6866
mRNA_6867
mRNA_6868
mRNA_6869
15233
15234
15235
15236
15237
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-1.2
-0.2
growth on ricinoleic acid
YNB Glucose
0.1
0.1
-0.5
growth on oleic acid
YNB Oleic Acid
0.1
-0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.2
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.2
-0.6
growth on oleic acid
YNB Glucose
0.0
0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
0.1
-0.2
growth on ypd
YPD
0.1
0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.5
0.1
-0.6
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.2
0.2
auxotrophy
YNB Glucose
0.7
-0.2
-0.2
auxotrophy
Dropout Complete
0.4
0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.1
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.1
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.4
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
0.5
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.9
0.4
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