Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6865: 15233 - HMMPfam-Spc24 subunit of Ndc80-PF08286,SUPERFAMILY--SSF143026, at 308236 to 309069 15233 mRNA_6866: 15234 - Hypothetical Protein, at 309366 to 310327 15234 mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310458 to 312954 15235 mRNA_6868: 15236 - Hypothetical Protein, at 312999 to 313640 15236 mRNA_6869: 15237 - K06125 COQ2 4-hydroxybenzoate polyprenyltransferase, at 314323 to 315416 15237
Group Condition mRNA_6865 mRNA_6866 mRNA_6867 mRNA_6868 mRNA_6869
15233
15234
15235
15236
15237
ypd buoyancy 40 hrs No Buoyancy Separation   -0.3 -1.2 -0.2  
growth on ricinoleic acid YNB Glucose   0.1 0.1 -0.5  
growth on oleic acid YNB Oleic Acid   0.1 -0.2 -0.2  
growth on ricinoleic acid YNB Ricinoleic Acid   0.3 0.2 -0.8  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.3 0.2 -0.6  
growth on oleic acid YNB Glucose   0.0 0.2 -0.2  
auxotrophy YNB Glucose 75mM Methionine   0.4 -0.2 -0.2  
ypd buoyancy 40 hrs High Buoyancy   0.2 0.1 -0.2  
growth on ypd YPD   0.1 0.2 -0.2  
auxotrophy YNB Glucose 75mM Arginine   0.5 0.1 -0.6  
ypd buoyancy 40 hrs Median Buoyancy   0.2 -0.2 0.2  
auxotrophy YNB Glucose   0.7 -0.2 -0.2  
auxotrophy Dropout Complete   0.4 0.1 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate   -0.0 0.1 0.3  
facs on lipid accumulation Sorted Low BODIPY Gate   0.0 0.1 0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2 0.2 0.2  
ypd buoyancy 40 hrs Low Buoyancy   0.2 0.1 0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 0.2 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 0.4 0.2  
facs on lipid accumulation Sorted High BODIPY Gate   0.4 0.5 0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 0.9 0.4  
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