Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6864: 15232 - K18416 THEX1, ERI1 3'-5' exoribonuclease 1, at 305954 to 308144 15232 mRNA_6865: 15233 - HMMPfam-Spc24 subunit of Ndc80-PF08286,SUPERFAMILY--SSF143026, at 308236 to 309069 15233 mRNA_6866: 15234 - Hypothetical Protein, at 309366 to 310327 15234 mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310458 to 312954 15235 mRNA_6868: 15236 - Hypothetical Protein, at 312999 to 313640 15236
Group Condition mRNA_6864 mRNA_6865 mRNA_6866 mRNA_6867 mRNA_6868
15232
15233
15234
15235
15236
ypd buoyancy 40 hrs No Buoyancy Separation 0.4   -0.3 -1.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5   0.3 0.2 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4   0.3 0.2 -0.6
growth on oleic acid YNB Oleic Acid -0.3   0.1 -0.2 -0.2
growth on ricinoleic acid YNB Glucose -0.2   0.1 0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.4   0.4 -0.2 -0.2
growth on oleic acid YNB Glucose -0.1   0.0 0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3   0.5 0.1 -0.6
ypd buoyancy 40 hrs High Buoyancy 0.1   0.2 0.1 -0.2
auxotrophy YNB Glucose -0.1   0.7 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4   0.2 0.2 0.1
auxotrophy Dropout Complete -0.1   0.4 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.2 -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1   -0.0 0.1 0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1   0.0 0.1 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   0.2 0.2 0.2
growth on ypd YPD 0.3   0.1 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0   0.2 0.1 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   0.1 0.4 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3   0.3 0.9 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.1   0.4 0.5 0.5
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