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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6860: 15228 - K07513 ACAA1 acetyl-CoA acyltransferase 1, at 299588 to 301362
15228
mRNA_6861: 15229 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 301646 to 303773
15229
mRNA_6862: 15230 - KOG0754 Mitochondrial oxodicarboxylate carrier protein, at 303833 to 305130
15230
mRNA_6863: 15231 - HMMPfam-Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like-PF05365,SUPERFAMILY--SSF81514, at 305544 to 305791
15231
mRNA_6864: 15232 - K18416 THEX1, ERI1 3'-5' exoribonuclease 1, at 305954 to 308144
15232
Group
Condition
mRNA_6860
mRNA_6861
mRNA_6862
mRNA_6863
mRNA_6864
15228
15229
15230
15231
15232
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
0.3
-1.1
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.3
-0.6
-0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.6
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.1
-0.5
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.5
0.0
-0.0
-0.4
growth on ypd
YPD
0.4
-0.8
-0.7
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
-0.5
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.1
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
0.2
-1.2
0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.0
-0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.2
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.0
-0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.0
-0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.5
0.0
-0.4
auxotrophy
YNB Glucose
0.3
0.1
-0.2
-0.1
growth on oleic acid
YNB Glucose
0.6
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.2
-0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.1
0.3
0.4
auxotrophy
Dropout Complete
0.5
0.1
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.3
-0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.8
0.2
-0.4
-0.1
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