Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6840: 15208 - SUPERFAMILY--SSF81383, at 245238 to 247225 15208 mRNA_6841: 15209 - K14328 UPF3, RENT3 regulator of nonsense transcripts 3, at 247342 to 248930 15209 mRNA_6842: 15210 - K02605 ORC3 origin recognition complex subunit 3, at 248976 to 251916 15210 mRNA_6843: 15211 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 252039 to 252813 15211 mRNA_6844: 15212 - K12183 TSG101, STP22, VPS23 ESCRT-I complex subunit TSG101, at 253096 to 258115 15212
Group Condition mRNA_6840 mRNA_6841 mRNA_6842 mRNA_6843 mRNA_6844
15208
15209
15210
15211
15212
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     -2.9 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2     -1.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1     -1.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0     -0.8 -0.1
growth on ricinoleic acid YNB Glucose -0.0     -0.6 -0.3
growth on oleic acid YNB Oleic Acid 0.2     -0.7 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0     -0.6 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1     -0.6 -0.1
growth on oleic acid YNB Glucose 0.1     -0.3 0.1
growth on ypd YPD -0.0     0.4 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1     -0.1 0.2
auxotrophy YNB Glucose -0.2     -0.3 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.0     -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.2     -0.3 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0     0.2 0.2
ypd buoyancy 40 hrs High Buoyancy -0.1     -0.0 0.5
auxotrophy Dropout Complete -0.1     0.1 0.4
auxotrophy YNB Glucose 75mM Arginine 0.1     -0.2 0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.2     -0.1 0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1     0.9 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1     0.5 0.2
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