Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6839: 15207 - K17257 ITFG1 integrin alpha FG-GAP repeat containing protein 1, at 242700 to 245129 15207 mRNA_6840: 15208 - SUPERFAMILY--SSF81383, at 245238 to 247225 15208 mRNA_6841: 15209 - K14328 UPF3, RENT3 regulator of nonsense transcripts 3, at 247342 to 248930 15209 mRNA_6842: 15210 - K02605 ORC3 origin recognition complex subunit 3, at 248976 to 251916 15210 mRNA_6843: 15211 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 252039 to 252813 15211
Group Condition mRNA_6839 mRNA_6840 mRNA_6841 mRNA_6842 mRNA_6843
15207
15208
15209
15210
15211
growth on ricinoleic acid YNB Ricinoleic Acid 0.7 0.1     -2.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1     -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.0     -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 0.2     -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 1.5 -0.2     -1.7
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.0     -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.1     -0.6
growth on ypd YPD -0.3 -0.0     0.4
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1     -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.0     -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0     0.2
growth on ricinoleic acid YNB Glucose 1.0 -0.0     -0.6
ypd buoyancy 40 hrs Low Buoyancy 0.5 0.2     -0.3
growth on oleic acid YNB Oleic Acid 1.0 0.2     -0.7
growth on oleic acid YNB Glucose 0.7 0.1     -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1     0.9
auxotrophy YNB Glucose 75mM Methionine 0.9 -0.1     -0.1
auxotrophy YNB Glucose 1.3 -0.2     -0.3
auxotrophy YNB Glucose 75mM Arginine 1.0 0.1     -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.1     0.5
auxotrophy Dropout Complete 1.3 -0.1     0.1
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