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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6827: 15195 - K19029 PFKFB2 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 2, at 220795 to 223587
15195
mRNA_6828: 15196 - K17338 REEP1_2_3_4 receptor expression-enhancing protein 1/2/3/4, at 223853 to 225358
15196
mRNA_6829: 15197 - HMMPfam-TAP42-like family-PF04177, at 225875 to 227277
15197
mRNA_6830: 15198 - K07893 RAB6A Ras-related protein Rab-6A, at 227427 to 228724
15198
mRNA_6831: 15199 - HMMPfam-ATP synthase regulation protein NCA2-PF08637, at 229033 to 229533
15199
Group
Condition
mRNA_6827
mRNA_6828
mRNA_6829
mRNA_6830
mRNA_6831
15195
15196
15197
15198
15199
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
0.0
-2.8
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.2
-1.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
-0.2
-1.9
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-1.1
-1.1
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
0.3
-1.5
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
-1.8
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.3
-1.1
-0.0
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.7
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.3
0.5
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.5
0.3
-0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
0.6
-0.8
-0.5
growth on ypd
YPD
-0.2
-0.4
-0.2
0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
-0.3
0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.5
-0.7
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
-0.4
0.6
auxotrophy
Dropout Complete
0.0
-0.5
0.2
0.3
growth on oleic acid
YNB Oleic Acid
0.7
-0.1
-0.3
0.0
auxotrophy
YNB Glucose
0.0
0.1
-0.4
0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.4
0.2
0.5
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