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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6814: 15182 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 199925 to 200316
15182
mRNA_6815: 15183 - HMMPfam-PUB domain-PF09409,SUPERFAMILY--SSF143503, at 200696 to 201916
15183
mRNA_6816: 15184 - K02437 gcvH, GCSH glycine cleavage system H protein, at 202088 to 202810
15184
mRNA_6817: 15185 - KOG3525 Subtilisin-like proprotein convertase, at 203064 to 206112
15185
mRNA_6818: 15186 - KOG0729 26S proteasome regulatory complex, ATPase RPT1, at 206564 to 206841
15186
Group
Condition
mRNA_6814
mRNA_6815
mRNA_6816
mRNA_6817
mRNA_6818
15182
15183
15184
15185
15186
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.1
-0.1
-2.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-0.2
-0.2
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.8
-0.2
-0.4
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.2
-0.3
-1.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.5
0.1
-1.9
auxotrophy
Dropout Complete
-0.7
-0.3
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.3
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.3
-0.4
0.2
growth on oleic acid
YNB Glucose
0.0
-0.2
-0.1
-0.7
auxotrophy
YNB Glucose
-0.3
-0.2
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.0
-0.4
-0.7
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
0.0
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.4
-0.2
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.2
-0.2
-0.6
growth on ricinoleic acid
YNB Glucose
0.1
-0.5
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.3
-0.2
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.2
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.0
-0.2
-0.1
growth on ypd
YPD
-0.1
0.1
0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
0.4
-0.1
-0.1
0.2
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