Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6812: 15180 - K00074 paaH, hbd, fadB, mmgB 3-hydroxybutyryl-CoA dehydrogenase, at 196368 to 197656 15180 mRNA_6813: 15181 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 198108 to 198984 15181 mRNA_6814: 15182 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 199925 to 200316 15182 mRNA_6815: 15183 - HMMPfam-PUB domain-PF09409,SUPERFAMILY--SSF143503, at 200696 to 201916 15183 mRNA_6816: 15184 - K02437 gcvH, GCSH glycine cleavage system H protein, at 202088 to 202810 15184
Group Condition mRNA_6812 mRNA_6813 mRNA_6814 mRNA_6815 mRNA_6816
15180
15181
15182
15183
15184
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 -0.8 -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.1 -0.9 -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.1 -0.7 -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 0.1 -0.3 -0.3  
auxotrophy Dropout Complete 0.1 -0.1 -0.7 -0.3  
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.1 -0.5 -0.1  
auxotrophy YNB Glucose -0.2 -0.1 -0.3 -0.2  
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 -0.2 -0.3  
growth on oleic acid YNB Oleic Acid -0.2 -0.1 0.1 -0.1  
growth on oleic acid YNB Glucose -0.1 -0.1 0.0 -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.2 -0.2 -0.4  
growth on ricinoleic acid YNB Glucose -0.0 0.2 0.1 -0.5  
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.0 -0.1 -0.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.3 -0.2 0.2  
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.2 0.1 -0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 0.1 0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.0 0.2 -0.2  
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2 -0.0 0.0  
growth on ypd YPD -0.0 0.6 -0.1 0.1  
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1 0.4 -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.2 -0.2 0.5  
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