Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6809: 15177 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 191872 to 193044 15177 mRNA_6810: 15178 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 193397 to 194230 15178 mRNA_6811: 15179 - K03953 NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9, at 194472 to 196083 15179 mRNA_6812: 15180 - K00074 paaH, hbd, fadB, mmgB 3-hydroxybutyryl-CoA dehydrogenase, at 196368 to 197656 15180 mRNA_6813: 15181 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 198108 to 198984 15181
Group Condition mRNA_6809 mRNA_6810 mRNA_6811 mRNA_6812 mRNA_6813
15177
15178
15179
15180
15181
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.4   -0.6 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.5   -0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.5   -0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.2   -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.6 0.0   -0.0 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.4   0.0 -0.0
growth on oleic acid YNB Oleic Acid -0.2 0.1   -0.2 -0.1
growth on oleic acid YNB Glucose -0.3 0.1   -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.3   0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 0.2   0.1 0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.4   0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1   0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.4   0.4 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.5 -0.1   -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.1   0.1 -0.1
auxotrophy YNB Glucose -0.2 0.5   -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.3 0.3   -0.1 -0.4
auxotrophy Dropout Complete -0.3 0.6   0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2   -0.2 0.2
growth on ypd YPD -0.2 -0.0   -0.0 0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 0.4   0.1 -0.2
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