Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6807: 15175 - HMMPfam-GRIP domain-PF01465,ProSiteProfiles-GRIP domain profile.-PS50913,SMART-golgin-97, RanBP2alpha,Imh1p and p230/golgin-245-SM00755, at 178332 to 182273 15175 mRNA_6808: 15176 - K12856 PRPF8, PRP8 pre-mRNA-processing factor 8, at 182860 to 191504 15176 mRNA_6809: 15177 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 191872 to 193044 15177 mRNA_6810: 15178 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 193397 to 194230 15178 mRNA_6811: 15179 - K03953 NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9, at 194472 to 196083 15179
Group Condition mRNA_6807 mRNA_6808 mRNA_6809 mRNA_6810 mRNA_6811
15175
15176
15177
15178
15179
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.6 0.2 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.1 -0.5 -0.2  
growth on ricinoleic acid YNB Glucose 0.2 -0.2 -0.6 0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.2 -0.5 -0.4  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.5 0.3 -0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.4 -0.4 -0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 1.0 -0.6 -0.5  
auxotrophy YNB Glucose -0.1 -0.3 -0.2 0.5  
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.6 0.5 -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.8 -0.3 -0.4  
growth on ypd YPD 0.1 0.2 -0.2 -0.0  
auxotrophy Dropout Complete 0.0 0.0 -0.3 0.6  
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.7 -0.1 -0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.7 0.2 -0.6 0.2  
auxotrophy YNB Glucose 75mM Methionine -0.0 0.0 0.3 0.3  
growth on oleic acid YNB Glucose 0.3 0.4 -0.3 0.1  
ypd buoyancy 40 hrs High Buoyancy 0.1 0.8 0.1 -0.4  
growth on oleic acid YNB Oleic Acid 0.4 0.6 -0.2 0.1  
auxotrophy YNB Glucose 75mM Arginine 0.0 0.6 -0.1 0.4  
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.7 -0.0 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.7 0.4 0.1 0.2  
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