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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6806: 15174 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 176839 to 177908
15174
mRNA_6807: 15175 - HMMPfam-GRIP domain-PF01465,ProSiteProfiles-GRIP domain profile.-PS50913,SMART-golgin-97, RanBP2alpha,Imh1p and p230/golgin-245-SM00755, at 178332 to 182273
15175
mRNA_6808: 15176 - K12856 PRPF8, PRP8 pre-mRNA-processing factor 8, at 182860 to 191504
15176
mRNA_6809: 15177 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 191872 to 193044
15177
mRNA_6810: 15178 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 193397 to 194230
15178
Group
Condition
mRNA_6806
mRNA_6807
mRNA_6808
mRNA_6809
mRNA_6810
15174
15175
15176
15177
15178
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.6
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.1
-0.5
-0.2
growth on ricinoleic acid
YNB Glucose
0.2
-0.2
-0.6
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.2
-0.5
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.5
0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.4
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
1.0
-0.6
-0.5
auxotrophy
YNB Glucose
-0.1
-0.3
-0.2
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.6
0.5
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.8
-0.3
-0.4
growth on ypd
YPD
0.1
0.2
-0.2
-0.0
auxotrophy
Dropout Complete
0.0
0.0
-0.3
0.6
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.7
-0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
0.2
-0.6
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.0
0.3
0.3
growth on oleic acid
YNB Glucose
0.3
0.4
-0.3
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.8
0.1
-0.4
growth on oleic acid
YNB Oleic Acid
0.4
0.6
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.6
-0.1
0.4
ypd buoyancy
40 hrs Low Buoyancy
0.4
0.7
-0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.7
0.4
0.1
0.2
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