Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6799: 15167 - K00033 PGD, gnd, gntZ 6-phosphogluconate dehydrogenase, at 163328 to 165722 15167 mRNA_6800: 15168 - K04709 LAG1 Acyl-CoA-dependent ceramide synthase, at 165891 to 167581 15168 mRNA_6801: 15169 - K15279 SLC35C1, FUCT1 solute carrier family 35 (GDP-fucose transporter), member C1, at 168460 to 170274 15169 mRNA_6802: 15170 - Hypothetical Protein, at 170561 to 172312 15170 mRNA_6803: 15171 - KOG3131 Uncharacterized conserved protein, at 172404 to 173557 15171
Group Condition mRNA_6799 mRNA_6800 mRNA_6801 mRNA_6802 mRNA_6803
15167
15168
15169
15170
15171
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 -1.5 -0.6 -0.7 0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.8 -1.7 0.1 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -2.2 -0.2 0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.2 -0.2 0.7 -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy -1.9 -0.3 -0.2 -0.1 0.5
facs on lipid accumulation Sorted High BODIPY Gate -1.5 -0.9 0.5 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 -0.1 0.1 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 0.1 0.1 0.0 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.2 -0.0 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.0 -0.2 -0.4 0.3
growth on oleic acid YNB Glucose 0.2 -0.3 0.6 0.2 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -1.4 2.3 0.3 0.8
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.4 0.6 -0.3 0.3
growth on ypd YPD 1.5 -0.4 0.2 0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine 1.2 -0.3 0.3 0.4 0.0
auxotrophy YNB Glucose 75mM Arginine 1.6 -0.1 0.1 0.3 0.0
growth on oleic acid YNB Oleic Acid 0.0 0.5 1.5 -0.0 0.4
growth on ricinoleic acid YNB Glucose 0.8 -0.1 1.0 0.3 0.3
auxotrophy YNB Glucose 1.9 0.2 0.4 0.3 -0.1
auxotrophy Dropout Complete 1.8 1.0 0.8 0.2 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.8 1.6 0.4 1.0
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