Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6791: 15159 - K00888 PI4KA phosphatidylinositol 4-kinase A, at 136109 to 143352 15159 mRNA_6792: 15160 - K14396 PABPN1, PABP2 polyadenylate-binding protein 2, at 143720 to 144685 15160 mRNA_6793: 15161 - KOG2375 Protein interacting with poly(A)-binding protein, at 144793 to 148155 15161 mRNA_6794: 15162 - K10773 NTH endonuclease III, at 148472 to 150085 15162 mRNA_6795: 15163 - KOG3548 DNA damage checkpoint protein RHP9/CRB2/53BP1, at 150190 to 154769 15163
Group Condition mRNA_6791 mRNA_6792 mRNA_6793 mRNA_6794 mRNA_6795
15159
15160
15161
15162
15163
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.0 -3.3 0.7 0.0
growth on ypd YPD -1.6 -0.2 -0.2 0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.2 -0.9 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.2 -0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 -0.0 -0.7 0.6 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.9 0.1 0.1 0.5 0.2
auxotrophy YNB Glucose 75mM Methionine -0.7 0.2 0.0 -0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.2 -0.0 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 0.3 0.2 -0.7 -0.4
auxotrophy Dropout Complete -0.5 0.2 0.1 -0.2 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.0 0.5 0.1 0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 0.1 0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.5 -0.3 0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.4 0.4 0.2 0.1
auxotrophy YNB Glucose 0.4 0.3 0.3 0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.1 0.9 0.8 0.0
growth on oleic acid YNB Glucose 0.6 0.5 0.2 0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.3 1.5 0.8 -0.1
growth on oleic acid YNB Oleic Acid 1.2 0.6 1.0 -0.2 0.0
growth on ricinoleic acid YNB Glucose 1.4 0.3 0.4 0.9 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 1.3 0.7 1.6 1.0 -0.1
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