Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_6790: 15158 - K00671 E2.3.1.97, NMT glycylpeptide N-tetradecanoyltransferase, at 133483 to 136016 15158 mRNA_6791: 15159 - K00888 PI4KA phosphatidylinositol 4-kinase A, at 136109 to 143352 15159 mRNA_6792: 15160 - K14396 PABPN1, PABP2 polyadenylate-binding protein 2, at 143720 to 144685 15160 mRNA_6793: 15161 - KOG2375 Protein interacting with poly(A)-binding protein, at 144793 to 148155 15161 mRNA_6794: 15162 - K10773 NTH endonuclease III, at 148472 to 150085 15162
Group Condition mRNA_6790 mRNA_6791 mRNA_6792 mRNA_6793 mRNA_6794
15158
15159
15160
15161
15162
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.5 -0.0 -3.3 0.7
growth on ypd YPD   -1.6 -0.2 -0.2 0.1
ypd buoyancy 40 hrs No Buoyancy Separation   -0.7 -0.2 -0.9 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -1.9 0.1 0.1 0.5
facs on lipid accumulation Sorted No BODIPY Gate   -0.7 -0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.8 -0.0 -0.7 0.6
facs on lipid accumulation Sorted High BODIPY Gate   -0.4 -0.2 -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine   -0.7 0.2 0.0 -0.4
auxotrophy Dropout Complete   -0.5 0.2 0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate   -0.9 -0.0 0.5 0.1
ypd buoyancy 40 hrs Median Buoyancy   0.3 -0.5 -0.3 0.2
auxotrophy YNB Glucose 75mM Arginine   -0.1 0.3 0.2 -0.7
ypd buoyancy 40 hrs High Buoyancy   -0.4 -0.2 0.1 0.4
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.4 0.4 0.2
auxotrophy YNB Glucose   0.4 0.3 0.3 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.6 -0.1 0.9 0.8
growth on oleic acid YNB Glucose   0.6 0.5 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 0.3 1.5 0.8
growth on oleic acid YNB Oleic Acid   1.2 0.6 1.0 -0.2
growth on ricinoleic acid YNB Glucose   1.4 0.3 0.4 0.9
growth on ricinoleic acid YNB Methylricinoleic Acid   1.3 0.7 1.6 1.0
remove
mRNA_6790
plot		 remove
mRNA_6791
plot		 remove
mRNA_6792		 remove
mRNA_6793
plot		 remove
mRNA_6794
plot