Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6788: 15156 - K05853 ATP2A Ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum, at 127975 to 131651 15156 mRNA_6789: 15157 - KOG3335 Predicted coiled-coil protein, at 131775 to 132958 15157 mRNA_6790: 15158 - K00671 E2.3.1.97, NMT glycylpeptide N-tetradecanoyltransferase, at 133483 to 136016 15158 mRNA_6791: 15159 - K00888 PI4KA phosphatidylinositol 4-kinase A, at 136109 to 143352 15159 mRNA_6792: 15160 - K14396 PABPN1, PABP2 polyadenylate-binding protein 2, at 143720 to 144685 15160
Group Condition mRNA_6788 mRNA_6789 mRNA_6790 mRNA_6791 mRNA_6792
15156
15157
15158
15159
15160
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0     -1.9 0.1
growth on ypd YPD 0.1     -1.6 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.6     -0.7 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.6     -0.7 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2     -0.8 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1     -0.9 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5     -0.7 0.2
ypd buoyancy 40 hrs High Buoyancy -0.2     -0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2     -0.4 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1     -0.6 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6     -0.1 0.3
auxotrophy Dropout Complete -0.1     -0.5 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3     -0.5 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1     0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy 0.3     0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.1     -0.1 0.3
auxotrophy YNB Glucose -0.0     0.4 0.3
growth on oleic acid YNB Glucose 0.1     0.6 0.5
growth on ricinoleic acid YNB Glucose -0.1     1.4 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4     1.3 0.7
growth on oleic acid YNB Oleic Acid 0.4     1.2 0.6
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