Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6785: 15153 - K03860 PIGQ, GPI1 phosphatidylinositol glycan, class Q, at 123273 to 125638 15153 mRNA_6786: 15154 - K14784 CMS1 protein CMS1, at 125988 to 127224 15154 mRNA_6787: 15155 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 127368 to 127805 15155 mRNA_6788: 15156 - K05853 ATP2A Ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum, at 127975 to 131651 15156 mRNA_6789: 15157 - KOG3335 Predicted coiled-coil protein, at 131775 to 132958 15157
Group Condition mRNA_6785 mRNA_6786 mRNA_6787 mRNA_6788 mRNA_6789
15153
15154
15155
15156
15157
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -1.8   -0.6  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -2.2   -0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -2.7   0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -1.1   -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.9   -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -1.4   -0.0  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.8   -0.6  
auxotrophy Dropout Complete 0.3 -1.4   -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -1.5   0.3  
growth on oleic acid YNB Oleic Acid -0.1 -1.1   0.4  
growth on ypd YPD -0.3 -0.6   0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.6   -0.1  
growth on oleic acid YNB Glucose 0.2 -0.9   0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.4   -0.4  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.2   -0.5  
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.3   0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.3   -0.1  
auxotrophy YNB Glucose 0.2 -0.2   -0.0  
growth on ricinoleic acid YNB Glucose 0.2 0.2   -0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.6   0.3  
ypd buoyancy 40 hrs High Buoyancy 0.0 1.3   -0.2  
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