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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6773: 15141 - HMMPfam-Cation transporter/ATPase, N-terminus-PF00690,SUPERFAMILY--SSF81665, at 103147 to 103439
15141
mRNA_6774: 15142 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 103609 to 104047
15142
mRNA_6775: 15143 - K14784 CMS1 protein CMS1, at 104191 to 105444
15143
mRNA_6776: 15144 - KOG1183 N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis, at 106666 to 108156
15144
mRNA_6777: 15145 - Hypothetical Protein, at 108443 to 109222
15145
Group
Condition
mRNA_6773
mRNA_6774
mRNA_6775
mRNA_6776
mRNA_6777
15141
15142
15143
15144
15145
ypd buoyancy
40 hrs No Buoyancy Separation
-2.0
0.5
-1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
0.3
-1.5
growth on oleic acid
YNB Oleic Acid
-2.1
0.2
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.3
-1.2
growth on oleic acid
YNB Glucose
-2.0
0.2
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
0.1
-0.6
growth on ypd
YPD
-0.8
0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.0
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.3
0.7
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.3
-0.3
-1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-1.1
0.3
0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.3
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.7
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.8
0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.5
0.0
0.1
auxotrophy
YNB Glucose
0.9
0.3
0.2
auxotrophy
YNB Glucose 75mM Methionine
1.9
-0.2
0.1
auxotrophy
Dropout Complete
3.0
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
1.9
0.1
0.9
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