Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6772: 15140 - KOG0202 Ca2+ transporting ATPase, at 102291 to 102787 15140 mRNA_6773: 15141 - HMMPfam-Cation transporter/ATPase, N-terminus-PF00690,SUPERFAMILY--SSF81665, at 103147 to 103439 15141 mRNA_6774: 15142 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 103609 to 104047 15142 mRNA_6775: 15143 - K14784 CMS1 protein CMS1, at 104191 to 105444 15143 mRNA_6776: 15144 - KOG1183 N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis, at 106666 to 108156 15144
Group Condition mRNA_6772 mRNA_6773 mRNA_6774 mRNA_6775 mRNA_6776
15140
15141
15142
15143
15144
growth on oleic acid YNB Oleic Acid -0.3     -2.1 0.2
growth on oleic acid YNB Glucose -0.1     -2.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.8     -1.3 0.7
ypd buoyancy 40 hrs No Buoyancy Separation 0.2     -2.0 0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.7     -0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5     -0.6 0.3
growth on ricinoleic acid YNB Glucose 0.2     -1.1 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5     -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.7     0.7 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7     -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy 1.0     -0.3 -0.3
growth on ypd YPD 1.1     -0.8 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.6     0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3     0.2 0.0
ypd buoyancy 40 hrs High Buoyancy 0.2     0.8 0.0
auxotrophy YNB Glucose 75mM Methionine -0.7     1.9 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.6     0.5 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1     1.3 -0.3
auxotrophy YNB Glucose 0.2     0.9 0.3
auxotrophy Dropout Complete -1.4     3.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3     1.9 0.1
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