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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6768: 15136 - HMMPfam-DNA repair protein endonuclease SAE2/CtIP C-terminus-PF08573, at 90313 to 94205
15136
mRNA_6769: 15137 - K01953 asnB, ASNS asparagine synthase (glutamine-hydrolysing), at 94516 to 96583
15137
mRNA_6770: 15138 - K03350 APC3, CDC27 anaphase-promoting complex subunit 3, at 96842 to 100028
15138
mRNA_6771: 15139 - Hypothetical Protein, at 100994 to 101449
15139
mRNA_6772: 15140 - KOG0202 Ca2+ transporting ATPase, at 102291 to 102787
15140
Group
Condition
mRNA_6768
mRNA_6769
mRNA_6770
mRNA_6771
mRNA_6772
15136
15137
15138
15139
15140
ypd buoyancy
40 hrs No Buoyancy Separation
-1.6
-0.7
0.2
auxotrophy
Dropout Complete
-0.7
0.5
-1.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-1.9
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.6
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
0.0
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.4
-0.8
auxotrophy
YNB Glucose 75mM Methionine
-0.5
0.2
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
0.7
-0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-1.1
0.6
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.4
0.2
growth on oleic acid
YNB Glucose
-0.1
0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
0.0
0.6
growth on ricinoleic acid
YNB Glucose
-0.4
0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
1.0
-0.3
growth on oleic acid
YNB Oleic Acid
0.4
0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.5
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
-0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.0
0.7
ypd buoyancy
40 hrs Low Buoyancy
0.4
-0.6
1.0
auxotrophy
YNB Glucose
-0.2
1.7
0.2
growth on ypd
YPD
-0.8
3.1
1.1
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