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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6733: 15101 - KOG4412 26S proteasome regulatory complex, subunit PSMD10, at 20964 to 21791
15101
mRNA_6734: 15102 - Hypothetical Protein, at 21925 to 24629
15102
mRNA_6735: 15103 - Hypothetical Protein, at 24942 to 26366
15103
mRNA_6736: 15104 - K11527 K11527 two-component system, sensor histidine kinase and response regulator, at 26533 to 28608
15104
mRNA_6737: 15105 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 29328 to 32887
15105
Group
Condition
mRNA_6733
mRNA_6734
mRNA_6735
mRNA_6736
mRNA_6737
15101
15102
15103
15104
15105
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.1
-0.3
-0.2
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.2
0.1
-0.4
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-0.1
-0.2
-0.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.2
0.2
-0.2
-0.0
growth on ypd
YPD
-0.3
-0.3
0.1
0.1
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.1
0.1
-0.2
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.6
0.2
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.5
0.2
0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.2
0.0
0.2
0.0
auxotrophy
Dropout Complete
0.1
0.1
0.2
0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.1
0.2
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
0.5
-0.3
0.0
0.1
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.3
0.2
0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.2
0.2
0.1
-0.1
auxotrophy
YNB Glucose
0.1
0.1
0.2
0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.5
0.2
0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.1
-0.0
0.2
-0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
0.5
0.0
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.3
0.2
0.2
0.3
growth on oleic acid
YNB Glucose
0.1
0.2
0.3
0.2
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.2
0.2
0.2
0.4
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