Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6728: 15096 - K14309 NUP93, NIC96 nuclear pore complex protein Nup93, at 5048 to 8579 15096 mRNA_6729: 15097 - HMMPfam-Putative GTPase activating protein for Arf-PF01412,PRINTS-HIV Rev interacting protein signature-PR00405,ProSiteProfiles-ARF GTPase-activating proteins domain profile.-PS50115,SMART-Putative GTP-ase activating proteins for the small GTPase, ARF-SM00105,SUPERFAMILY--SSF57863, at 8871 to 11490 15097 mRNA_6730: 15098 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 12080 to 14125 15098 mRNA_6731: 15099 - BLAST putative Ran-binding protein [Rhizoctonia solani 123E], at 15699 to 18601 15099 mRNA_6732: 15100 - KOG1530 Rhodanese-related sulfurtransferase, at 19105 to 19903 15100
Group Condition mRNA_6728 mRNA_6729 mRNA_6730 mRNA_6731 mRNA_6732
15096
15097
15098
15099
15100
facs on lipid accumulation Sorted Low BODIPY Gate -2.3 0.1 0.1 -0.0  
auxotrophy YNB Glucose 75mM Methionine -0.8 -0.5 -0.2 -0.2  
auxotrophy Dropout Complete -0.7 -0.3 -0.3 -0.2  
growth on ricinoleic acid YNB Glucose -1.4 -0.2 0.0 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.1 0.1 0.3  
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.4 0.1 0.0  
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.3 -0.2 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.8 0.2 -0.1 -0.1  
growth on oleic acid YNB Glucose -0.3 -0.2 0.0 -0.2  
auxotrophy YNB Glucose -0.1 -0.2 -0.2 -0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.1 -0.2 -0.1  
ypd buoyancy 40 hrs High Buoyancy -0.3 0.4 -0.0 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.3 -0.0 0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.4 -0.1 -0.2 0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.3 0.3 -0.4  
growth on oleic acid YNB Oleic Acid 0.4 -0.1 0.2 0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.6 0.2 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.5 0.1 0.1  
growth on ypd YPD 0.9 -0.2 -0.0 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.7 0.2 -0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.1 0.3 0.1  
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