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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6717: 15085 - Hypothetical Protein, at 1524597 to 1524959
15085
mRNA_6718: 15086 - K13711 PI4K2 phosphatidylinositol 4-kinase type 2, at 1526282 to 1529015
15086
mRNA_6719: 15087 - Hypothetical Protein, at 1530010 to 1530905
15087
mRNA_6720: 15088 - K11293 HIRA, HIR1 protein HIRA/HIR1, at 1531665 to 1535330
15088
mRNA_6721: 15089 - K14554 UTP21, WDR36 U3 small nucleolar RNA-associated protein 21, at 1535454 to 1538954
15089
Group
Condition
mRNA_6717
mRNA_6718
mRNA_6719
mRNA_6720
mRNA_6721
15085
15086
15087
15088
15089
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.4
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.1
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
0.2
-1.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.4
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.0
-0.6
auxotrophy
YNB Glucose
0.0
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.0
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.2
-0.7
growth on ricinoleic acid
YNB Glucose
0.2
0.0
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
0.5
-0.9
growth on oleic acid
YNB Oleic Acid
0.1
0.1
-0.2
auxotrophy
Dropout Complete
0.1
0.2
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
0.3
growth on ypd
YPD
0.1
0.2
0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
0.2
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.0
0.3
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