Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_6702: 15070 - K08192 DAL MFS transporter, ACS family, allantoate permease, at 1485831 to 1488005
15070
mRNA_6703: 15071 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1488338 to 1490366
15071
mRNA_6704: 15072 - HMMPfam-Peptidase family M20/M25/M40-PF01546,HMMPfam-Peptidase dimerisation domain-PF07687,SUPERFAMILY--SSF53187,SUPERFAMILY--SSF55031,TIGRFAM-amidohydrolases amidohydrolase-TIGR01891, at 1490466 to 1492340
15072
mRNA_6705: 15073 - K11227 PBS2 mitogen-activated protein kinase kinase, at 1492601 to 1495154
15073
mRNA_6706: 15074 - K16261 YAT yeast amino acid transporter, at 1497015 to 1499228
15074
Group
Condition
mRNA_6702
mRNA_6703
mRNA_6704
mRNA_6705
mRNA_6706
15070
15071
15072
15073
15074
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.0
-0.2
-1.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.1
-0.4
-0.8
auxotrophy
YNB Glucose
-0.0
0.0
-0.3
-1.0
auxotrophy
Dropout Complete
-0.1
0.1
-0.1
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.0
-0.4
-0.4
growth on ypd
YPD
-0.2
0.1
-0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.2
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.5
-0.1
0.5
growth on oleic acid
YNB Glucose
-0.1
0.0
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
0.0
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
-0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
-0.1
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.2
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
-0.3
0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
-0.1
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.6
-0.1
0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.1
0.0
0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.1
0.3
0.7
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.1
0.2
1.0
remove
mRNA_6702
plot
remove
mRNA_6703
plot
remove
mRNA_6704
remove
mRNA_6705
plot
remove
mRNA_6706
plot