Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6701: 15069 - K08192 DAL MFS transporter, ACS family, allantoate permease, at 1482980 to 1485101 15069 mRNA_6702: 15070 - K08192 DAL MFS transporter, ACS family, allantoate permease, at 1485831 to 1488005 15070 mRNA_6703: 15071 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1488338 to 1490366 15071 mRNA_6704: 15072 - HMMPfam-Peptidase family M20/M25/M40-PF01546,HMMPfam-Peptidase dimerisation domain-PF07687,SUPERFAMILY--SSF53187,SUPERFAMILY--SSF55031,TIGRFAM-amidohydrolases amidohydrolase-TIGR01891, at 1490466 to 1492340 15072 mRNA_6705: 15073 - K11227 PBS2 mitogen-activated protein kinase kinase, at 1492601 to 1495154 15073
Group Condition mRNA_6701 mRNA_6702 mRNA_6703 mRNA_6704 mRNA_6705
15069
15070
15071
15072
15073
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 0.2 -0.2 -0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 -0.2 -0.0  
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.1 0.0 -0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 -0.5 -0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.6 -0.1 -0.0 -0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.1 -0.6 -0.1  
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.1 -0.0 0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.2 -0.1 0.1  
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 -0.1 -0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2 -0.1 -0.1  
growth on oleic acid YNB Glucose -0.2 -0.1 0.0 -0.1  
auxotrophy YNB Glucose 0.1 -0.0 0.0 -0.3  
growth on ricinoleic acid YNB Glucose 0.1 -0.1 -0.0 -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.2 0.1 0.3  
growth on oleic acid YNB Oleic Acid 0.0 -0.1 0.2 -0.1  
auxotrophy YNB Glucose 75mM Methionine 0.3 0.1 -0.0 -0.2  
growth on ypd YPD 0.4 -0.2 0.1 -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.2 0.1 0.0  
auxotrophy Dropout Complete 0.3 -0.1 0.1 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.0 0.1 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 0.1 -0.2 -0.3  
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