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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6700: 15068 - HMMPfam-Amidohydrolase family-PF07969,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 1481002 to 1482828
15068
mRNA_6701: 15069 - K08192 DAL MFS transporter, ACS family, allantoate permease, at 1482980 to 1485101
15069
mRNA_6702: 15070 - K08192 DAL MFS transporter, ACS family, allantoate permease, at 1485831 to 1488005
15070
mRNA_6703: 15071 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1488338 to 1490366
15071
mRNA_6704: 15072 - HMMPfam-Peptidase family M20/M25/M40-PF01546,HMMPfam-Peptidase dimerisation domain-PF07687,SUPERFAMILY--SSF53187,SUPERFAMILY--SSF55031,TIGRFAM-amidohydrolases amidohydrolase-TIGR01891, at 1490466 to 1492340
15072
Group
Condition
mRNA_6700
mRNA_6701
mRNA_6702
mRNA_6703
mRNA_6704
15068
15069
15070
15071
15072
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.7
0.1
0.0
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-1.1
0.2
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.5
-0.2
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.5
-0.1
-0.0
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.2
0.1
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.0
-0.2
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.0
-0.0
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.5
-0.2
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.5
-0.6
-0.1
-0.0
-0.1
growth on ypd
YPD
-0.4
0.4
-0.2
0.1
-0.2
growth on ricinoleic acid
YNB Glucose
0.1
0.1
-0.1
-0.0
-0.2
auxotrophy
YNB Glucose
0.1
0.1
-0.0
0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.3
0.1
-0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.1
-0.2
0.1
0.3
growth on oleic acid
YNB Oleic Acid
0.2
0.0
-0.1
0.2
-0.1
growth on oleic acid
YNB Glucose
0.7
-0.2
-0.1
0.0
-0.1
auxotrophy
Dropout Complete
0.2
0.3
-0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.8
0.1
-0.2
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.0
0.0
0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
0.2
-0.2
0.1
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
0.8
0.1
-0.2
-0.3
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