Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6697: 15065 - K07188 LIPE, HSL hormone-sensitive lipase, at 1472035 to 1475787 15065 mRNA_6698: 15066 - K00819 rocD, OAT ornithine--oxo-acid transaminase, at 1476138 to 1478780 15066 mRNA_6699: 15067 - HMMPfam-Peptidase family M20/M25/M40-PF01546,HMMPfam-Peptidase dimerisation domain-PF07687,PIRSF--PIRSF037226,SUPERFAMILY--SSF53187,SUPERFAMILY--SSF55031,TIGRFAM-amidohydrolases amidohydrolase-TIGR01891, at 1479159 to 1480660 15067 mRNA_6700: 15068 - HMMPfam-Amidohydrolase family-PF07969,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 1481002 to 1482828 15068 mRNA_6701: 15069 - K08192 DAL MFS transporter, ACS family, allantoate permease, at 1482980 to 1485101 15069
Group Condition mRNA_6697 mRNA_6698 mRNA_6699 mRNA_6700 mRNA_6701
15065
15066
15067
15068
15069
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.5 0.2 0.1 -1.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.0 -0.3 0.3 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5 0.4 0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.4 -1.2 0.8 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.2 -0.7 0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 -0.3 0.1 -0.0
growth on ypd YPD -0.0 -0.3 0.0 -0.4 0.4
auxotrophy YNB Glucose 0.1 -0.1 -0.5 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 0.3 0.2 -0.5
growth on ricinoleic acid YNB Glucose -0.1 0.3 -0.5 0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.0 -0.3 0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.3 0.4 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 0.0 -0.4 -0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.7 -0.3 0.6 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 0.4 0.5 -0.6
growth on oleic acid YNB Oleic Acid -0.2 0.1 0.1 0.2 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.3 0.8 -0.1 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.5 -0.5 0.6 0.8
auxotrophy Dropout Complete 0.2 -0.0 -0.0 0.2 0.3
growth on oleic acid YNB Glucose 0.1 0.2 0.4 0.7 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.4 0.5 0.3 0.0
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