Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6670: 15038 - K03676 grxC, GLRX, GLRX2 glutaredoxin 3, at 1408478 to 1409380 15038 mRNA_6671: 15039 - K08331 ATG13 autophagy-related protein 13, at 1410209 to 1413905 15039 mRNA_6672: 15040 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1414224 to 1415709 15040 mRNA_6673: 15041 - Hypothetical Protein, at 1416296 to 1417315 15041 mRNA_6674: 15042 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1418030 to 1419199 15042
Group Condition mRNA_6670 mRNA_6671 mRNA_6672 mRNA_6673 mRNA_6674
15038
15039
15040
15041
15042
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -0.4 -0.1 0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.5 0.0 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.3 -0.3 0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.6 -0.2 0.1 -0.2
growth on oleic acid YNB Glucose -0.5 -0.3 -0.4 -0.3 0.1
growth on oleic acid YNB Oleic Acid -0.5 -0.2 -0.4 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.8 -0.0 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.6 -0.2 0.1 0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 0.1 0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.1 -0.4 0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2 -0.1 -0.2 -0.0
auxotrophy Dropout Complete -0.6 0.0 -0.0 0.0 0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.2 0.0 -0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 0.1 0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.3 -0.1 0.2 0.3
auxotrophy YNB Glucose 75mM Methionine -0.9 -0.3 0.1 0.1 0.8
auxotrophy YNB Glucose -0.5 -0.2 0.1 0.1 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.1 0.2 -0.0 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.1 0.1 0.1 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.3 0.3 0.0 0.9
growth on ypd YPD 0.2 -0.3 0.7 0.0 1.0
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