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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6668: 15036 - K03509 POLH DNA polymerase eta, at 1403534 to 1406837
15036
mRNA_6669: 15037 - K03564 BCP, PRXQ, DOT5 peroxiredoxin Q/BCP, at 1407006 to 1408136
15037
mRNA_6670: 15038 - K03676 grxC, GLRX, GLRX2 glutaredoxin 3, at 1408478 to 1409380
15038
mRNA_6671: 15039 - K08331 ATG13 autophagy-related protein 13, at 1410209 to 1413905
15039
mRNA_6672: 15040 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1414224 to 1415709
15040
Group
Condition
mRNA_6668
mRNA_6669
mRNA_6670
mRNA_6671
mRNA_6672
15036
15037
15038
15039
15040
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.3
-1.0
-0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.0
-0.9
-0.5
0.0
growth on oleic acid
YNB Glucose
-0.2
-0.1
-0.5
-0.3
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
-0.5
-0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.7
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.1
-0.9
-0.3
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.2
-0.5
-0.6
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.6
-0.2
0.1
auxotrophy
YNB Glucose
0.1
-0.3
-0.5
-0.2
0.1
growth on ricinoleic acid
YNB Glucose
-0.3
0.0
-0.2
-0.2
0.0
auxotrophy
Dropout Complete
0.1
-0.1
-0.6
0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
0.1
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.2
-0.4
-0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.1
-0.1
-0.8
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.2
-0.2
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.1
-0.1
-0.2
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.2
0.4
-0.3
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
0.2
-0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.3
0.1
0.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.0
0.0
0.1
0.2
growth on ypd
YPD
-0.1
-0.0
0.2
-0.3
0.7
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