Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6668: 15036 - K03509 POLH DNA polymerase eta, at 1403534 to 1406837 15036 mRNA_6669: 15037 - K03564 BCP, PRXQ, DOT5 peroxiredoxin Q/BCP, at 1407006 to 1408136 15037 mRNA_6670: 15038 - K03676 grxC, GLRX, GLRX2 glutaredoxin 3, at 1408478 to 1409380 15038 mRNA_6671: 15039 - K08331 ATG13 autophagy-related protein 13, at 1410209 to 1413905 15039 mRNA_6672: 15040 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1414224 to 1415709 15040
Group Condition mRNA_6668 mRNA_6669 mRNA_6670 mRNA_6671 mRNA_6672
15036
15037
15038
15039
15040
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.3 -1.0 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.0 -0.9 -0.5 0.0
growth on oleic acid YNB Glucose -0.2 -0.1 -0.5 -0.3 -0.4
growth on oleic acid YNB Oleic Acid -0.1 -0.3 -0.5 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.7 -0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1 -0.9 -0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.2 -0.5 -0.6 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.6 -0.2 0.1
auxotrophy YNB Glucose 0.1 -0.3 -0.5 -0.2 0.1
growth on ricinoleic acid YNB Glucose -0.3 0.0 -0.2 -0.2 0.0
auxotrophy Dropout Complete 0.1 -0.1 -0.6 0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 0.1 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.2 -0.4 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.1 -0.1 -0.8 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.2 -0.2 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.1 -0.1 -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 0.4 -0.3 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 0.2 -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.3 0.1 0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.0 0.0 0.1 0.2
growth on ypd YPD -0.1 -0.0 0.2 -0.3 0.7
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