Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6664: 15032 - K03165 TOP3 DNA topoisomerase III, at 1384031 to 1388134 15032 mRNA_6665: 15033 - K01952 purL, PFAS phosphoribosylformylglycinamidine synthase, at 1389385 to 1393556 15033 mRNA_6666: 15034 - K18423 CSE1, CAS, XPO2 exportin-2 (importin alpha re-exporter), at 1393785 to 1397625 15034 mRNA_6667: 15035 - Hypothetical Protein, at 1397904 to 1402835 15035 mRNA_6668: 15036 - K03509 POLH DNA polymerase eta, at 1403534 to 1406837 15036
Group Condition mRNA_6664 mRNA_6665 mRNA_6666 mRNA_6667 mRNA_6668
15032
15033
15034
15035
15036
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.6     -0.3
growth on ricinoleic acid YNB Glucose -1.0 0.1     -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.7     -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -1.3     -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.5     -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.5     0.0
auxotrophy YNB Glucose -1.1 0.3     0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.0     -0.3
growth on oleic acid YNB Glucose -0.1 -0.1     -0.2
growth on oleic acid YNB Oleic Acid 0.2 -0.5     -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.0     -0.1
growth on ypd YPD -0.5 0.3     -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.1     0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 0.6     0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.2     0.4
auxotrophy YNB Glucose 75mM Arginine 0.2 0.5     -0.1
auxotrophy Dropout Complete -0.2 0.8     0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 0.8     0.1
ypd buoyancy 40 hrs Median Buoyancy 0.9 0.0     0.0
ypd buoyancy 40 hrs Low Buoyancy 0.8 0.3     -0.1
facs on lipid accumulation Sorted High BODIPY Gate 1.0 0.2     0.1
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