Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6655: 15023 - Interpro Domain of unknown function (DUF1772), at 1358691 to 1359757 15023 mRNA_6656: 15024 - KOG1674 Cyclin, at 1360120 to 1362447 15024 mRNA_6657: 15025 - K16302 CNNM metal transporter CNNM, at 1363504 to 1366738 15025 mRNA_6658: 15026 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-4Fe-4S ferredoxin-type iron-sulfur binding domain profile.-PS51379,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1366899 to 1370407 15026 mRNA_6659: 15027 - K05663 ABC.ATM mitochondrial ABC transporter ATM, at 1370693 to 1373174 15027
Group Condition mRNA_6655 mRNA_6656 mRNA_6657 mRNA_6658 mRNA_6659
15023
15024
15025
15026
15027
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -1.3 -0.1 -0.8  
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -1.2 0.0 -0.4  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.5 -0.2 -0.2  
growth on ypd YPD -0.1 -0.5 -0.1 -0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.4 -0.0 -0.3  
growth on ricinoleic acid YNB Glucose -0.1 -0.5 0.0 -0.1  
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.4 0.0 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.4 -0.1 0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.2 -0.0 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2 0.3 -0.6  
auxotrophy YNB Glucose 0.1 -0.6 0.2 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 0.2 -0.1  
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.4 0.2 0.2  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.1 -0.0 0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.4 0.2 -0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.2 0.2 -0.3  
growth on oleic acid YNB Glucose -0.0 0.0 0.2 0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.2 0.1 0.0  
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 0.3 0.4  
auxotrophy Dropout Complete 0.1 0.3 0.3 0.3  
growth on oleic acid YNB Oleic Acid 0.1 0.6 0.2 0.2  
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