Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6654: 15022 - K12462 ARHGDI, RHOGDI Rho GDP-dissociation inhibitor, at 1356168 to 1357307 15022 mRNA_6655: 15023 - Interpro Domain of unknown function (DUF1772), at 1358691 to 1359757 15023 mRNA_6656: 15024 - KOG1674 Cyclin, at 1360120 to 1362447 15024 mRNA_6657: 15025 - K16302 CNNM metal transporter CNNM, at 1363504 to 1366738 15025 mRNA_6658: 15026 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-4Fe-4S ferredoxin-type iron-sulfur binding domain profile.-PS51379,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1366899 to 1370407 15026
Group Condition mRNA_6654 mRNA_6655 mRNA_6656 mRNA_6657 mRNA_6658
15022
15023
15024
15025
15026
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.2 -1.3 -0.1 -0.8
growth on ricinoleic acid YNB Glucose -0.6 -0.1 -0.5 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.0 -1.2 0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.5 -0.2 -0.2
growth on ypd YPD -0.1 -0.1 -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 0.1 0.2 0.3 -0.6
auxotrophy YNB Glucose -0.4 0.1 -0.6 0.2 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.0 -0.4 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 0.3 0.4 0.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.1 -0.1 -0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.0 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.2 -0.4 -0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.2 0.2 0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.4 0.2 -0.4 0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.0 -0.2 -0.0 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2 -0.4 0.2 0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 0.1 -0.1 0.3 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.2 0.2 0.1 0.0
growth on oleic acid YNB Glucose 0.3 -0.0 0.0 0.2 0.3
auxotrophy Dropout Complete 0.1 0.1 0.3 0.3 0.3
growth on oleic acid YNB Oleic Acid 0.2 0.1 0.6 0.2 0.2
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