Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_6638: 15006 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1314134 to 1316580 15006 mRNA_6639: 15007 - K00362 nirB nitrite reductase (NADH) large subunit, at 1317697 to 1321815 15007 mRNA_6640: 15008 - K10534 NR nitrate reductase (NAD(P)H), at 1322487 to 1325707 15008 mRNA_6641: 15009 - K11863 ATXN3, MJD Ataxin-3, at 1326359 to 1327984 15009 mRNA_6642: 15010 - KOG2684 Sirtuin 5 and related class III sirtuins (SIR2 family), at 1328184 to 1330070 15010
Group Condition mRNA_6638 mRNA_6639 mRNA_6640 mRNA_6641 mRNA_6642
15006
15007
15008
15009
15010
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.3 -0.4 -0.5 -0.6
auxotrophy YNB Glucose -0.3 0.2 0.1 -0.2 -0.7
auxotrophy Dropout Complete -0.8 0.4 0.2 -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 0.1 0.3 -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.0 0.0 0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 0.0 -0.3 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.3 0.2 0.1 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.2 -0.1 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.2 -0.1 0.0 -0.3
growth on oleic acid YNB Glucose -0.3 0.0 -0.0 0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.3 0.3 -0.3 -0.2
growth on ypd YPD 0.3 -0.1 -0.0 -0.4 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.1 0.1 -0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.0 0.1 0.3 -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1 0.2 -0.5 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 0.1 0.3 -0.0
growth on oleic acid YNB Oleic Acid -0.0 0.0 0.1 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.0 -0.0 0.4 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.1 0.0 0.2 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.3 -0.0 0.8 0.5
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2 0.0 0.8 0.4
remove
mRNA_6638
plot		 remove
mRNA_6639
plot		 remove
mRNA_6640		 remove
mRNA_6641
plot		 remove
mRNA_6642
plot