Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6636: 15004 - K14403 CPSF3, YSH1 cleavage and polyadenylation specificity factor subunit 3, at 1305979 to 1309273 15004 mRNA_6637: 15005 - K15711 SMARCA3, HLTF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3, at 1309484 to 1313910 15005 mRNA_6638: 15006 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1314134 to 1316580 15006 mRNA_6639: 15007 - K00362 nirB nitrite reductase (NADH) large subunit, at 1317697 to 1321815 15007 mRNA_6640: 15008 - K10534 NR nitrate reductase (NAD(P)H), at 1322487 to 1325707 15008
Group Condition mRNA_6636 mRNA_6637 mRNA_6638 mRNA_6639 mRNA_6640
15004
15005
15006
15007
15008
facs on lipid accumulation Sorted Low BODIPY Gate     -1.0 -0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate     -0.5 -0.0 0.0
growth on ricinoleic acid YNB Ricinoleic Acid     -0.9 0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation     -0.1 -0.3 -0.0
growth on oleic acid YNB Glucose     -0.3 0.0 -0.0
auxotrophy Dropout Complete     -0.8 0.4 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.2 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy     -0.0 0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy     -0.1 -0.0 0.1
auxotrophy YNB Glucose 75mM Methionine     -0.3 0.2 0.1
auxotrophy YNB Glucose     -0.3 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.0 -0.1 0.1
growth on oleic acid YNB Oleic Acid     -0.0 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine     -0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.2 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy     -0.0 0.2 0.0
growth on ypd YPD     0.3 -0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.3 0.3 0.3
growth on ricinoleic acid YNB Glucose     -0.0 0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate     0.1 0.1 0.2
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