Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6635: 15003 - HMMPfam-Peptidase family M48-PF01435, at 1302314 to 1305791 15003 mRNA_6636: 15004 - K14403 CPSF3, YSH1 cleavage and polyadenylation specificity factor subunit 3, at 1305979 to 1309273 15004 mRNA_6637: 15005 - K15711 SMARCA3, HLTF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3, at 1309484 to 1313910 15005 mRNA_6638: 15006 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1314134 to 1316580 15006 mRNA_6639: 15007 - K00362 nirB nitrite reductase (NADH) large subunit, at 1317697 to 1321815 15007
Group Condition mRNA_6635 mRNA_6636 mRNA_6637 mRNA_6638 mRNA_6639
15003
15004
15005
15006
15007
facs on lipid accumulation Sorted Low BODIPY Gate -0.3     -1.0 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     -0.9 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1     -0.5 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2     -0.1 -0.3
growth on oleic acid YNB Glucose 0.2     -0.3 0.0
auxotrophy Dropout Complete 0.2     -0.8 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0     0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1     0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0     0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0     0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2     -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1     -0.0 0.0
growth on oleic acid YNB Oleic Acid 0.1     -0.0 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.0     0.1 0.1
auxotrophy YNB Glucose 0.3     -0.3 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2     -0.3 0.3
growth on ricinoleic acid YNB Glucose 0.2     -0.0 0.1
auxotrophy YNB Glucose 75mM Methionine 0.4     -0.3 0.2
growth on ypd YPD 0.1     0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.3     -0.1 0.2
ypd buoyancy 40 hrs High Buoyancy 0.3     -0.0 0.2
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