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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6634: 15002 - K02734 PSMB2 20S proteasome subunit beta 4, at 1300925 to 1301957
15002
mRNA_6635: 15003 - HMMPfam-Peptidase family M48-PF01435, at 1302314 to 1305791
15003
mRNA_6636: 15004 - K14403 CPSF3, YSH1 cleavage and polyadenylation specificity factor subunit 3, at 1305979 to 1309273
15004
mRNA_6637: 15005 - K15711 SMARCA3, HLTF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3, at 1309484 to 1313910
15005
mRNA_6638: 15006 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1314134 to 1316580
15006
Group
Condition
mRNA_6634
mRNA_6635
mRNA_6636
mRNA_6637
mRNA_6638
15002
15003
15004
15005
15006
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.9
auxotrophy
Dropout Complete
0.2
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.5
growth on oleic acid
YNB Glucose
0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.0
auxotrophy
YNB Glucose
0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.1
growth on oleic acid
YNB Oleic Acid
0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.2
growth on ricinoleic acid
YNB Glucose
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.2
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.0
growth on ypd
YPD
0.1
0.3
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