Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6633: 15001 - KOG1114 Tripeptidyl peptidase II, at 1296721 to 1300268 15001 mRNA_6634: 15002 - K02734 PSMB2 20S proteasome subunit beta 4, at 1300925 to 1301957 15002 mRNA_6635: 15003 - HMMPfam-Peptidase family M48-PF01435, at 1302314 to 1305791 15003 mRNA_6636: 15004 - K14403 CPSF3, YSH1 cleavage and polyadenylation specificity factor subunit 3, at 1305979 to 1309273 15004 mRNA_6637: 15005 - K15711 SMARCA3, HLTF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3, at 1309484 to 1313910 15005
Group Condition mRNA_6633 mRNA_6634 mRNA_6635 mRNA_6636 mRNA_6637
15001
15002
15003
15004
15005
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   -0.0    
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   -0.3    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   -0.0    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   -0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.0    
growth on oleic acid YNB Oleic Acid -0.1   0.1    
growth on ypd YPD 0.0   0.1    
ypd buoyancy 40 hrs Low Buoyancy 0.0   0.1    
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   0.1    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0   0.2    
growth on oleic acid YNB Glucose 0.1   0.2    
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.2    
facs on lipid accumulation Sorted No BODIPY Gate 0.1   0.1    
auxotrophy Dropout Complete 0.0   0.2    
growth on ricinoleic acid YNB Glucose 0.2   0.2    
ypd buoyancy 40 hrs High Buoyancy 0.1   0.3    
facs on lipid accumulation Sorted High BODIPY Gate 0.4   0.0    
auxotrophy YNB Glucose 75mM Arginine 0.1   0.3    
auxotrophy YNB Glucose 0.2   0.3    
auxotrophy YNB Glucose 75mM Methionine 0.1   0.4    
ypd buoyancy 40 hrs No Buoyancy Separation 0.5   0.2    
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