Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6628: 14996 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 1284165 to 1286987 14996 mRNA_6629: 14997 - KOG0538 Glycolate oxidase, at 1287348 to 1288864 14997 mRNA_6630: 14998 - KOG0463 GTP-binding protein GP-1, at 1289134 to 1291878 14998 mRNA_6631: 14999 - K11429 SUV420H histone-lysine N-methyltransferase SUV420H, at 1292866 to 1293273 14999 mRNA_6632: 15000 - BLAST histone-lysine N-methyltransferase SUV420H [Rhodo..., at 1294779 to 1296409 15000
Group Condition mRNA_6628 mRNA_6629 mRNA_6630 mRNA_6631 mRNA_6632
14996
14997
14998
14999
15000
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 -0.3 -0.5 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.6 0.1 -0.5 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.5 -0.1 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.7 -0.2 -0.3 -0.0
growth on ypd YPD 0.2 -0.4 0.0 0.0 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.4 -0.2 -0.2 -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3 0.3 -0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.1 -0.4 -0.2 0.2
growth on oleic acid YNB Oleic Acid 0.0 0.1 -0.1 0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.3 -0.4 -0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.3 -0.1 -0.5 0.2
growth on oleic acid YNB Glucose 0.1 0.2 -0.2 -0.3 0.1
auxotrophy Dropout Complete 0.1 0.2 -0.2 0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 -0.0 -0.1 0.1
auxotrophy YNB Glucose 0.1 0.0 -0.3 0.5 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.3 0.2 -0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 0.0 0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.0 -0.1 0.2
growth on ricinoleic acid YNB Glucose 0.1 0.3 -0.3 0.7 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 0.4 -0.2 0.3 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.6 -0.2 -0.3 0.3
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